Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807629.1_cds_XP_016494904.1_9275
CDS Infomation

[gene=LOC107814089] [db_xref=GeneID:107814089] [protein=E3 ubiquitin protein ligase DRIP2-like] [protein_id=XP_016494904.1] [location=join(153545..153659,154426..154525,156447..156774,156905..157350,157449..157499,161485..161557,161974..162153)] [gbkey=CDS]
Sequence

ATGTCGAATCAAGTGGTGAATGTGAGAAGGGATAGGATTGGGGCATGCATGACATGCCCT
CTTTGTCATAAGCTCTTCAGAGATGCAACTACTATTTCCGAATGTCTTCATACGTTTTGC
AGGAAATGCATCTACAAGAAGTTGTCTGATGAAGAAACGGAATGCTGTCCGATTTGCAAT
ATCGACTTAGGCTGTGTTCCTTTAGAGAAATTGAGGCCAGATCACAATCTGCAAGATGTG
AGAGCAAAGGTATTCCCTTATAAGAGGCGAAAGGTGGACGCACCTGAAATTATGCCTTCA
GTTGCATTGCCAGTAAGGAGAAAGGAGAGATCGCTCTCGTCACTTGTGGTCAGCACTCCA
AGAGTATCTACACAAACTGGAATGACAGGAAGAAGATCAAAATCGGTGGCAAGAAAAACA
TTACGGGGTTCCACCTTTTCAATTGAGAAACCTGTCAAGAAAGAAGAAGGTTCTGGAGAA
GATCAACTGGATAGCTCTAGCTCACCTGAGACTTTGAACAAGTTCACTCAGAACATAAGG
CTGAATTCTTCCAGTGGTGAGCCTTCTGACCACCCTACACCTGATAAAGAAATTGCAAAC
GGCAGTAAACAGTGGGAAGGCAAAGTTGATTTGTGGAAACCTTTAAATTGTTTGGTAGAA
GCAGCAAACAGGAGCAAATCATCGAGGTTTTCCTCACAGGGTTCTACCGCTAAGTCAGAA
GGTGTGCAGTCCCATGACCGTGAGGGTCATGTCCGTAAAACTAAAGTCAAAGAACATGGG
CACAAATTGAAGATCAAGGATGATAATAATGATGATCCTGGTCCTCAAGAATTTGATAAA
CCTAAGAAATCACGTAGAATTCGCCAAAAGAAGGCATCAGCTTTTGGAGAGTTTAATATT
TCACCGCAAACTGTGCTGGATGCAACCAGTGCCAGATGTGAAAGAAGAATCTATCCAATA
TGGTTCTCATTAGTGGCCTCTGAAGACCAGGAGGGAGATACACCCTTGCCACAGATTTCT
GGGAGTTACTTGAGAATAAAAGACGGTAACATTCCAGTTTCTTTCATCCAAAAATACCTG
GTGAGGAAGTTGGATCTTAAGAGCGAAGACGAGGTTGAGATTAGATGTATGGGACAATCA
ATAGCCCCCAGTTTACCACTTAACAGTTTGGTTGATATGTGGCTTCAAACTACTACATCC
GAAAGAATACCAGCAATTATTGGTTCATCAGCAAAGGACTTTGTGATGGTGTTGGCTTAT
GCTCGAAAGATTCCAGTCGTTCCAGCTTCTTGA

Peptide Sequence

PEP ID

XP_016494904.1
PEP Infomation

PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Nicotiana tabacum]
Sequence

MSNQVVNVRRDRIGACMTCPLCHKLFRDATTISECLHTFCRKCIYKKLSDEETECCPICN
IDLGCVPLEKLRPDHNLQDVRAKVFPYKRRKVDAPEIMPSVALPVRRKERSLSSLVVSTP
RVSTQTGMTGRRSKSVARKTLRGSTFSIEKPVKKEEGSGEDQLDSSSSPETLNKFTQNIR
LNSSSGEPSDHPTPDKEIANGSKQWEGKVDLWKPLNCLVEAANRSKSSRFSSQGSTAKSE
GVQSHDREGHVRKTKVKEHGHKLKIKDDNNDDPGPQEFDKPKKSRRIRQKKASAFGEFNI
SPQTVLDATSARCERRIYPIWFSLVASEDQEGDTPLPQISGSYLRIKDGNIPVSFIQKYL
VRKLDLKSEDEVEIRCMGQSIAPSLPLNSLVDMWLQTTTSERIPAIIGSSAKDFVMVLAY
ARKIPVVPAS

Transcript Sequence

Gene sequence data has not been registered.